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TOSATTO SILVIO: PUBBLICAZIONI

1 Tosatto SC, Bindewald E, Hesser J, Männer R.
A divide and conquer approach to fast loop modeling.
PROTEIN ENG. Apr 2002; 15(4): 279-86
2 Albrecht M, Tosatto SC, Lengauer T, Valle G.
Simple consensus procedures are effective and sufficient in secondary structure prediction.
PROTEIN ENG. Jul 2003; 16(7): 459-62
3 Bindewald E, Cestaro A, Hesser J, Heiler M, Tosatto SC.
MANIFOLD: protein fold recognition based on secondary structure, sequence similarity and enzyme classification.
PROTEIN ENG. Nov 2003; 16(11): 785-789
4 Fontana P, Bindewald E, Toppo S, Velasco R, Valle G, Tosatto SC.
The SSEA server for protein secondary structure alignment.
BIOINFORMATICS. Sep 2004
5 Fogolari F, Tosatto SC.
Application of MM/PBSA colony free energy to loop decoy discrimination: Toward correlation between energy and root mean square deviation.
PROTEIN SCI. Apr 2005; 14(4): 889-901
6 Maiorino M, Roveri A, Benazzi L, Bosello V, Mauri P, Toppo S, Tosatto SC, Ursini F.
Functional interaction of phospholid hydroperoxide glutathione peroxidase with sperm mitochondrion-associated cysteine-rich protein discloses the adjacent cysteine motif as a new substrate of the SE-peroxidase.
J BIOL CHEM. Sep 2005
7 Albrecht M, Huthmacher C, Tosatto SC, Lengauer T.
Decomposing protein networks into domain-domain interactions.
BIOINFORMATICS. Sep 2005; 21 Suppl 2: ii220-ii221
8 Spisni E, Tomasi V, Cestaro A, Tosatto SC.
Structural insights into the function of human caveolin 1.
BIOCHEM BIOPH RES CO. Oct 2005
9 Tosatto SC, Giacometti GM, Valle G, Costantini P.
Functional insights from the structural modelling of a small Fe-hydrogenase.
BIOCHEM BIOPH RES CO. Nov 2005
10 Fogolari F, Tosatto SC, Colombo G.
A decoy set for the thermostable subdomain from chicken villin headpiece, comparison of different free energy estimators.
BMC BIOINFORMATICS. Dec 2005; 6(1): 301
11 Tosatto SC.
The Victor/FRST Function for Model Quality Estimation.
J COMPUT BIOL. Dec 2005; 12(10): 1316-27
12 Tosatto SC, Toppo S.
Large-scale prediction of protein structure and function from sequence.
CURR PHARM DESIGN. 2006; 12(17): 2067-86
13 Sommer I, Toppo S, Sander O, Lengauer T, Tosatto SC.
Improving the quality of protein structure models by selecting from alignment alternatives.
BMC BIOINFORMATICS. Jul 2006; 7(1): 364
14 Maiorino M, Ursini F, Bosello V, Toppo S, Tosatto SC, Mauri P, Becker K, Roveri A, Bulato C, Benazzi L, De Palma A, Floh L.
The Thioredoxin Specificity of Drosophila GPx: A Paradigm for a Peroxiredoxin-like Mechanism of many Glutathione Peroxidases.
J MOL BIOL. Oct 2006
15 Vullo A, Bortolami O, Pollastri G, Tosatto SC.
Spritz: a server for the prediction of intrinsically disordered regions in protein sequences using kernel machines.
NUCLEIC ACIDS RES. Jul 2006; 34(Web Server issue): W164-8
16 Tosatto SCE.
Proteine disordinate: la fine di un paradigma?.
Prometeus. JAN 2006; 10: 6-6
17 Albiero A, Tosatto SCE.
Fine-grained statistical torsion angle potentials are effective in discriminating native protein structures.
Curr Drug Discov Technol. FEB 2006; 3(1): 75-81
18 Tosatto SCE, Albiero A, Mantovan A, Ferrari C, Bindewald E, Toppo S.
Align: a c++ class library and web server for rapid sequence alignment prototyping.
Current Drug Discovey Technologies. 2006; 3(3): 167-173
19 Linde CI, Di Leva F, Domi T, Tosatto SC, Brini M, Carafoli E.
Inhibitory interaction of the 14-3-3 proteins with ubiquitous (PMCA1) and tissue-specific (PMCA3) isoforms of the plasma membrane Ca(2+) pump.
CELL CALCIUM. Oct 2007
20 Hemsley MJ, Mazzotta GM, Mason M, Dissel S, Toppo S, Pagano MA, Sandrelli F, Meggio F, Rosato E, Costa R, Tosatto SC.
Linear motifs in the C-terminus of D. melanogaster cryptochrome.
BIOCHEM BIOPH RES CO. Feb 2007
21 Tosatto SC, Battistutta R.
TAP score: torsion angle propensity normalization applied to local protein structure evaluation.
BMC BIOINFORMATICS. May 2007; 8(1): 155
22 Trovato A, Seno F, Tosatto SC.
The PASTA server for protein aggregation prediction.
PROTEIN ENG DES SEL. Aug 2007
23 Tosatto SCE, Toppo S, Carbonera D, Giacometti GM, Costantini P.
Comparative analysis of Fe-only hydrogenase from Thermotogales indicates the molecular basis of resistance to oxygen inactivation.
INT J HYDROGEN ENERG. DEC 2007; 33: 570-578
24 Benkert P, Tosatto SC, Schomburg D.
QMEAN: A comprehensive scoring function for model quality assessment.
PROTEINS. Oct 2007
25 Sirocco F, Tosatto SC.
TESE: Generating specific protein structure test set ensembles.
BIOINFORMATICS. Sep 2008
26 Parasassi T, De Spirito M, Mei G, Brunelli R, Greco G, Lenzi L, Maulucci G, Nicolai E, Papi M, Arcovito G, Tosatto SC, Ursini F.
Low density lipoprotein misfolding and amyloidogenesis.
FASEB J. Feb 2008
27 Toppo S, Vanin S, Bosello V, Tosatto SC.
Evolutionary and Structural Insights Into the Multifaceted Glutathione Peroxidase (Gpx) Superfamily.
ANTIOXID REDOX SIGN. May 2008
28 Tosatto SC, Bosello V, Fogolari F, Mauri P, Roveri A, Toppo S, Floh L, Ursini F, Maiorino M.
The Catalytic Site of Glutathione Peroxidases.
ANTIOXID REDOX SIGN. May 2008
29 Ferretti M, Destro T, Tosatto SC, La Rocca N, Rascio N, Masi A.
Gamma-glutamyl transferase in the cell wall participates in extracellular glutathione salvage from the root apoplast.
NEW PHYTOL. 2009; 181(1): 115-26
30 Muraro L, Tosatto S, Motterlini L, Rossetto O, Montecucco C.
The N-terminal half of the receptor domain of botulinum neurotoxin A binds to microdomains of the plasma membrane.
BIOCHEM BIOPH RES CO. Jan 2009
31 Nobile C, Michelucci R, Andreazza S, Pasini E, Tosatto SC, Striano P.
LGI1 mutations in autosomal dominant and sporadic lateral temporal epilepsy.
HUM MUTAT. Feb 2009
32 Benkert P, Tosatto SCE, Schwede T.
Global and local model quality estimation at CASP8 using the scoring functions QMEAN and QMEANclust.
PROTEINS. 2009; Epub ahead of print: 1-1
33 Benkert P, Schwede T, Tosatto SCE.
QMEANclust: Estimation of protein model quality by combining a composite scoring function with structural density information.
BMC STRUCT BIOL. 2009; 9: 35
34 Marsella L, Sirocco F, Trovato A, Seno F, Tosatto SCE.
REPETITA: Detection and discrimination of the periodicity of protein solenoid repeatsby discrete Fourier transform.
BIOINFORMATICS. 2009; 25: 289-295
35 Fogolari F, Tosatto SCE, Muraro L, Montecucco C.
Electric dipole reorientation in the interaction of botulinum neurotoxins with neuronal membranes.
FEBS LETT. 2009; 583: 2321-2325